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Publications Related to Protein structure prediction

  1. A Generalized Framework for Protein Sequence Annotation. Huzefa Rangwala, Christopher Kauffman, and George Karypis.  UMN TR# 07-023, 2007.

  1. YASSPP: Better Kernels and Coding Schemes Lead to Improvements in SVM-basedSecondary Structure Prediction. George Karypis.  PROTEINS: Structure, Function, and Bioinformatics, 2006.

  1. Profile Based Direct Kernels for Remote Homology Detection and Fold Recognition. Huzefa Rangwala and George Karypis.  Bioinformatics, Vol. 31, No. 23, pp. 4239 - 4247, 2005.

  1. Prediction of Contact Maps Using Support Vector Machines. Ying Zhao and George Karypis.  3rd IEEE International Conference on Bioinformatics and Bioengineering (BIBE), pp. 26 - 33, 2003.