Publications
I make it my practice to provide online versions of the
research papers that I have
(co)-authored over the years.
These papers have been broadly categorized into seven different areas:
| Includes papers on clustering, classification, pattern discovery, and graph mining. |
| Includes papers related to our research on multilevel graph and circuit partitioning algorithms and their applications. |
| Includes papers on protein structure prediction, remote homology prediction, fold recognition, sequence clustering and classification, and string kernels. |
| Includes papers on small molecule descriptors, virtual screening, compound classification, scaffold-hopping, and compound retrieval. |
| Includes papers on search, meta-search, dimensionality reduction, and document clustering and classification. |
| Includes papers on algorithms for recommender systems. |
| Includes papers describing parallel algorithms for problems in dynamic programming, data mining, graph partitioning, heuristic tree search, and papers scheduling and load balancing parallel computations. |
| Includes papers on direct and iterative methods for solving linear systems of equations, preconditioners, linear programming, and load balancing mesh-based computations. |