Complete list of publications

  1. Genome-wide Inference of Regulatory Networks in Streptomyces Coelicolor.

    Marlene Castro-Melchor, Salim Charaniya, George Karypis, Eriko Takano, and Wei-Shou Hu. BMC Genomics, Vol. 11, pp. 578, 2010.

  1. Mining manufacturing data for discovery of high productivity process characteristics.

    Salim Charaniya, Huong Le, Huzefa Rangwala, Keri Mills, Kevin Johnson, George Karypis, and Wei-Shou Hu. Journal of Biotechnology, Vol. 147, pp. 186—197, 2010.

  1. A Novel Approach to Compute Similarities and its Application to Item Recommendation.

    Christian Desrosiers and George Karypis. 11th Pacific Rim International Conference on Artificial Intelligence (PRICAI), pp. 39—51, 2010.

  1. The Set Classification Problem and Solution Methods.

    Xia Ning and George Karypis. SIAM Data Mining, pp. 847-858, 2009.

  1. A kernel framework for protein residue annotation.

    Huzefa Rangwala, Christopher Kauffman, and George Karypis. PAKDD, pp. 439-451, 2009.

  1. TOPTMH: Topology Predictor for Transmembrane alpha-Helices.

    Rezwan Ahmed, Huzefa Rangwala, and George Karypis. Journal of Bioinformatics and Computational Biology, 2009.

  1. Within-network classification using local structure similarity.

    Christian Desrosiers and George Karypis. ECML-PKDD, pp. 260-275, 2009.

  1. Mining bioprocess data: opportunities and challenges.

    Salim Charaniya, Wei-Shou Hu, and George Karypis. Trends in Biotechnology, 2009.

  1. Improved estimation of structure predictor quality.

    Kevin W. Deronne and George Karypis. BMC Structural Biology, 9:41, 2009.

  1. Mining Transcriptome Data for Function-Trait Relationship of Hyper Productivty of Recombinant Antibody.

    Salim Charaniya, George Karypis, and We-Shou Hu. Biotechnology & Bioengineering, Vol. 102, No. 6, pp. 1654-1669, 2009.

  1. Multi-Assay-Based SAR Models: Improving SAR Models by Incorporating Activity Information from Related Targets.

    Xia Ning, Huzefa Rangwala, and George Karypis. J. Chem. Inf. Modeling, 2009.